NGS & Long-read Publications
10 August 2023 | American Journal of Obstetrics and Gynecology, https://doi.org/10.1016/j.ajog.2023.08.004
Rapid detection of bacteria and antimicrobial resistant genes in intraamniotic infection using nanopore adaptive sampling
23 June 2023 | Front. Genet. Sec. Pharmacogenetics and Pharmacogenomics
Volume 14 - 2023 | https://doi.org/10.3389/fgene.2023.1213
Ultrarapid and high-resolution HLA class I typing using transposase-based nanopore sequencing applied in pharmacogenetic testing
20 MARCH 2023 | Scientific Reports volume 13, Article number: 4540 (2023)
Nanopore Sequencing Discloses Compositional Quality of Commercial Probiotic Feed Supplements
10 May 2023 | Scientific Reports volume 13, Article number: 7573 (2023)
https://rdcu.be/dbQVG
12 December 22 | Journal of Perinatal Medicine
Rapid diagnosis of intra-amniotic infection using nanopore-based sequencing
22 August 2022 | Microbiology Resource Announcements Vol. 11, No. 9
Long-Read 16S rRNA Amplicon and Metagenomic Data of Swine Feed-Additive Probiotics Product
5 July 2022 | Microbiology Spectrum, Vol. 10, No. 4
Novel Organization of the Staphylococcal Cassette Chromosome mec Composite Island in Clinical Staphylococcus haemolyticus and Staphylococcus hominis Subspecies hominis Isolates from Dogs
01 May 2022 | Methods in Molecular Biology book series (MIMB,volume 2477)
Direct Sequencing of RNA and RNA Modification Identification Using Nanopore
12 April 2022 | Frontiers in Bioengineering and Biotechnology 10:842299
https://doi.org/10.3389/fbioe.2022.842299
Native RNA or cDNA Sequencing for Transcriptomic Analysis: A Case Study on Saccharomyces cerevisiae
30 December 2021 | Acta Neuropathologica | https://doi.org/10.1007/s00401-021-02395-z
Oligosarcomas, IDH‑mutant are distinct and aggressive
23 December 2021 | Molecular Cell https://doi.org/10.1016/j.molcel.2021.11.027
Circular DNA in the human germline and its association with recombination
01 October 2021 | MICROBIAL GENOMICS
Is amplification bias consequential in transposon sequencing (TnSeq) assays? A case study with a Staphylococcus aureus TnSeq library subjected to PCR-based and amplification-free enrichment methods
23 September 2020 | Front. Bioeng. Biotechnol https://doi.org/10.3389/fbioe.2020.556413
KITSUNE: A Tool for Identifying Empirically Optimal K-mer Length for Alignment-Free Phylogenomic Analysis
1 October 2020 | Microbiology Resource Announcement| Volume 9 Issue 40 e00949-20
Complete Genome Sequences of Four Extensively Drug-Resistant Acinetobacter baumanniiIsolates from Thailand
(Credit figure: Wikipedia)
13 Nov 2020 | PeerJ, DOI 10.7717/peerj.10340
Optimization of high molecular weight DNA extraction methods in shrimp for a long-read sequencing platform
24 June 2020 | Sci Rep 10, 10241 (2020) | https://doi.org/10.1038/s41598-020-66857-2
Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
25 July 2020 | Nucleic Acids Research, doi.org/10.1093/nar/gkaa620
Decoding the epitranscriptional landscape from native RNA sequences
17 AUGUST 2020 | Chem. Res. Toxicol., https://doi.org/10.1021/acs.chemrestox.0c00202
Detection and discrimination of DNA adducts differing in size, regiochemistry and functional group by nanopore sequencing
22 May 2020 | Open Forum Infectious Diseases, https://doi.org/10.1093/ofid/ofaa180
Two Cases of Vancomycin Resistant Enterococcus faecium Bacteremia with Development of Daptomycin Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing
11 June 2020 | Microbiology Resource Announcements, DOI: 10.1128/MRA.00248-20
16S rRNA Gene Amplicon Profiling of Baby and Adult Captive Elephants in Thailand
20 June 2020 | Acta Neuropathologica Communications, volume 8, Article number: 87 (2020)
A novel Cas9-targeted long-read assay for simultaneous detection of IDH1/2 mutations and clinically relevant MGMT methylation in fresh biopsies of diffuse glioma
10 MARCH 2020 | Gene, 144559
Systematic genome analysis of a novel arachidonic acid-producing strain uncovered unique metabolic traits in the production of acetyl-CoA-derived products in Mortierellale fungi
7 May 2020 | MRA,DOI: 10.1128/MRA.00198-20
Complete Genome Sequences of Three Neisseria gonorrhoeae Isolates from Thailand with Multidrug Resistance and Multilocus Sequence Type 1903
13 May 2020 | Journal of Dietary Supplements doi.org/10.1080/19390211.2020.1761506
Potential Probiotic or Trigger of Gut Inflammation – The Janus-Faced Nature of Cannabidiol-Rich Cannabis Extract
21 February 2020 | Medical Research Archives , Vol 8 Issue 2
A Glioblastoma Genomics Primer for Clinicians
11 November 2019 | Neuro-Oncology, Volume 21, Issue Supplement_6, November 2019, Page vi101
TRANSCRIPTOME-WIDE ANALYSIS USING NANOPORE THIRD GENERATION SEQUENCING IN A RAT GLIOBLASTOMA MODEL: PROOF OF PRINCIPLE
6 February 2020 | Microbiology Resource Announcements, Volume 9 Issue 6 01380-19
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia
1 November 2019 | Journal of Microbiological Methods, Volume 166, 105739
An assessment of Oxford Nanopore sequencing for human gut metagenome profiling: A pilot study of head and neck cancer patients
1 November 2019 | Infection, Genetics and Evolution, Volume 75, 103965
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016
11 April 2019 | Microbiology Resource Announcements, Volume 8 Issue 15 e00222-19
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection
25 February 2019 | Front. Microbiol.
Rapid Sequencing of Multiple RNA Viruses in Their Native Form
28 February 2019 | Microbiology Resource Announcement, Volume 8 Issue 9 e00046-19
Complete Genome and Plasmid Sequences of Escherichia coliType Strain ATCC 11775
1 September 2018 | Emerging Infectious Diseases, Volume 24, Number 9
Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
17 December 2018 | BioRxiv, doi: https://doi.org/10.1101/487819
Decoding the Epitranscriptional Landscape from Native RNA Sequences
20 April 2018 | Nucleic Acids Research, Volume 46, Issue 7, Page e38
Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
10 August 2017 | Genome Announcements, Volume 5 Issue 32 e00555-17
Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA